PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT14094
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 402aa    MW: 43687.8 Da    PI: 6.5266
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT14094genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.43.3e-50211491129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrFhPtdee+++ yL +k  + ++   +++ evd++++eP+dLp k++ +ekewyfF+++d ky+tg+r+nratk+gyWkatgkd+e+++   +elv
  EMT14094  21 LPPGFRFHPTDEEIITSYLLRKFLDPSFAP-RAVGEVDLNSCEPRDLPGKANMGEKEWYFFVHKDLKYPTGSRANRATKEGYWKATGKDREIFKPrARELV 120
               79*************************888.88***************99999****************************************9867788* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrle 129
               g+kktLvfy+grap+g k++Wvmhe+rle
  EMT14094 121 GMKKTLVFYTGRAPRGAKSEWVMHEFRLE 149
               **************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-5818172IPR003441NAC domain
PROSITE profilePS5100556.3821172IPR003441NAC domain
PfamPF023652.1E-2622148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MVESVAASPS EEQGRGGGLS LPPGFRFHPT DEEIITSYLL RKFLDPSFAP RAVGEVDLNS  60
CEPRDLPGKA NMGEKEWYFF VHKDLKYPTG SRANRATKEG YWKATGKDRE IFKPRARELV  120
GMKKTLVFYT GRAPRGAKSE WVMHEFRLEG KSRGQTMNNP KDEWVVCKVF NKKGEAKATR  180
AADVDAEYSA VTTPNASSVV DAGEGAGDFT DSMFTIDPLC YIPNSDEYTS NQLPAKTTTT  240
TTTNSAAPPY NADYYYPSVP TTAGSFNVMS NYSLTNAPSN AQTPPAMASS VPATSGSSWQ  300
HMLMNTAPHG MMGRRSYDVN LHEQQAIMLR ALGGVVGAQN FGEPEKGLQL PSPAVTAGSV  360
LPQQGKLGSY DDGEFPYGNY DLASAAMNGR PAADNNLGAR FY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swp_D1e-491917718173NAC domain-containing protein 19
3swp_C1e-491917718173NAC domain-containing protein 19
3swp_B1e-491917718173NAC domain-containing protein 19
3swp_A1e-491917718173NAC domain-containing protein 19
3swm_D1e-491917718173NAC domain-containing protein 19
3swm_C1e-491917718173NAC domain-containing protein 19
3swm_B1e-491917718173NAC domain-containing protein 19
3swm_A1e-491917718173NAC domain-containing protein 19
4dul_B1e-491917715170NAC domain-containing protein 19
4dul_A1e-491917715170NAC domain-containing protein 19
1ut7_B1e-491917715170NO APICAL MERISTEM PROTEIN
1ut7_A1e-491917715170NO APICAL MERISTEM PROTEIN
1ut4_B1e-491917715170NO APICAL MERISTEM PROTEIN
1ut4_A1e-491917715170NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM0275730.0HM027573.1 Triticum aestivum NAC transcription factor 8 (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977422.11e-111PREDICTED: NAC domain-containing protein 77-like
SwissprotQ5CD173e-91NAC77_ORYSJ; NAC domain-containing protein 77
TrEMBLN1QWL90.0N1QWL9_AEGTA; NAC domain-containing protein 77
STRINGMLOC_5832.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51203063
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.12e-73NAC family protein